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From systems biology to photosynthesis and whole-plant physiology: a conceptual model for integrating multi-scale networks.

Identifieur interne : 002A78 ( Main/Exploration ); précédent : 002A77; suivant : 002A79

From systems biology to photosynthesis and whole-plant physiology: a conceptual model for integrating multi-scale networks.

Auteurs : David J. Weston [États-Unis] ; Paul J. Hanson ; Richard J. Norby ; Gerald A. Tuskan ; Stan D. Wullschleger

Source :

Plant signaling & behavior [ 1559-2324 ] ; 2012.

RBID : pubmed:22353873

Descripteurs français

KwdFr :
- Algorithmes (MeSH), Arabidopsis (physiologie), Biologie des systèmes (méthodes), Modèles biologiques (MeSH), Photosynthèse (MeSH), Populus (physiologie), Soja (physiologie), Température élevée (MeSH).
MESH :
- méthodes : Biologie des systèmes.
- physiologie : Arabidopsis, Populus, Soja.
- Algorithmes, Modèles biologiques, Photosynthèse, Température élevée.

English descriptors

KwdEn :
- Algorithms (MeSH), Arabidopsis (physiology), Hot Temperature (MeSH), Models, Biological (MeSH), Photosynthesis (MeSH), Populus (physiology), Soybeans (physiology), Systems Biology (methods).
MESH :
- methods : Systems Biology.
- physiology : Arabidopsis, Populus, Soybeans.
- Algorithms, Hot Temperature, Models, Biological, Photosynthesis.

Abstract

Network analysis is now a common statistical tool for molecular biologists. Network algorithms are readily used to model gene, protein and metabolic correlations providing insight into pathways driving biological phenomenon. One output from such an analysis is a candidate gene list that can be responsible, in part, for the biological process of interest. The question remains, however, as to whether molecular network analysis can be used to inform process models at higher levels of biological organization. In our previous work, transcriptional networks derived from three plant species were constructed, interrogated for orthology and then correlated with photosynthetic inhibition at elevated temperature. One unique aspect of that study was the link from co-expression networks to net photosynthesis. In this addendum, we propose a conceptual model where traditional network analysis can be linked to whole-plant models thereby informing predictions on key processes such as photosynthesis, nutrient uptake and assimilation, and C partitioning.

DOI: 10.4161/psb.18802
PubMed: 22353873
PubMed Central: PMC3405708

Affiliations:

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Le document en format XML

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From systems biology to photosynthesis and whole-plant physiology: a conceptual model for integrating multi-scale networks.

From systems biology to photosynthesis and whole-plant physiology: a conceptual model for integrating multi-scale networks.

Source :

Descripteurs français

English descriptors

Abstract

Links toward previous steps (curation, corpus...)

Le document en format XML

Pour manipuler ce document sous Unix (Dilib)

Pour mettre un lien sur cette page dans le réseau Wicri

Pour générer des pages wiki